Pre-compiled datasets
======================
Test datasets
-------------
Test dataset can be downloaded from `this link `_
Reference gene models
---------------------
Reference gene model files can be downloaded from `this link `_
Annotation datasets
--------------------
- pre-built TSV file used to annotate CpG according to its 450K/850K probe ID.
* `MethylationEPIC_CpGtools.tsv.gz `_
- BED files used to annotate CpG according to its genomic positions (hg19/GRCh37)
* `hg19_ENCODE_338TF_130Cell_E3.bed.gz `_
* `hg19_ENCODE_DNaseI_125Cells_V3.bed.gz `_
* `hg19_ENCODE_H3K27ac_11_cellLines_ChIP.bed.gz `_
* `hg19_ENCODE_H3K4me1_11_cellLines_ChIP.bed.gz `_
* `hg19_ENCODE_H3K4me3_11_cellLines_ChIP.bed.gz `_
* `hg19_ENCODE_chromHMM_states_9Cells.merge.bed.gz `_
* `hg19_FANTOM_enhancers_phase_1_and_2.bed.gz `_
- BED files used to annotate CpG according to its genomic locations (hg38/GRCh38)
* `hg38_ENCODE_338TF_130Cell_E3.bed.gz `_
* `hg38_ENCODE_DNaseI_125Cells_V3.bed.gz `_
* `hg38_ENCODE_H3K27ac_11_cellLines_ChIP.bed.gz `_
* `hg38_ENCODE_H3K4me1_11_cellLines_ChIP.bed.gz `_
* `hg38_ENCODE_H3K4me3_11_cellLines_ChIP.bed.gz `_
* `hg38_ENCODE_chromHMM_states_9Cells.merge.bed.gz `_
* `hg38_FANTOM_enhancers_phase_1_and_2.bed.gz `_